Rust Pairwise-alignment Resources

align: a command line utility for aligning text. ⭐ Overview Aligns text within the terminal (or a specified number of columns). The text is treated as

Cargo Featalign Cargo features alignment tool. Introduction The original version of this project can be found at subalfred check features. Upon furthe

A "Naive" Implementation of the Wavefront Algorithm for Sequence Alignment with Gap-Affine Scoring This repository contains some simple code that I wr

Core-SNP-filter This is a tool to filter sites (i.e. columns) in a FASTA-format whole-genome pseudo-alignment based on: Whether the site contains vari

Robust and Fast tokenizations alignment library for Rust and Python

Robust and Fast tokenizations alignment library for Rust and Python Demo: demo Rust document: docs.rs Blog post: How to calculate the alignment betwee

fasebare Rust crate needleman_wunsch of the fasebare package: reading FASTA sequences, Needleman-Wunsch alignment. Synopsis The crate needleman_wunsch

Compute a pairwise SNP distance matrix from one or two alignment(s) Table of Contents Motivation Install cargo conda Precompiled binaries homebrew Con

Alen Simple terminal sequence alignment viewer. What is Alen? It's a command-like program to view DNA or protein alignments in FASTA formats. Alen is

zero-copy-pads Padding/aligning values without heap allocation. Cargo Features std (default feature): Disable #![no_std]. Enable features that require

biodiff Compare binary files using alignment algorithms. What is this This is a tool for binary diffing. The tool is able to show two binary files sid