3 Repositories
Rust kmers Libraries
Given a set of kmers (fasta format) and a set of sequences (fasta format), this tool will extract the sequences containing the kmers.
Kmer2sequences Description Given a set of kmers (fasta / fastq [.gz] format) and a set of sequences (fasta / fastq [.gz] format), this tool will extra
22 Sep 16, 2023
k-mer counter in Rust using the rust-bio and rayon crates
krust is a k-mer counter written in Rust and run from the command line that will output canonical k-mers and their frequency across the records in a f
14 Jan 7, 2023
A bit-packed k-mer representation (and relevant utilities) for rust
K-mer class for rust The purpose of this repository is to build a simple library that exposes a bit-packed k-mer class for use in rust-based bioinform
41 Dec 15, 2022