5 Repositories
Rust abundance-estimation Libraries
Kernel density estimation in Rust.
kernel-density-estimation Kernel density estimation in Rust. Kernel density estimation (KDE) is a non-parametric method to estimate the probability de
16 Jan 16, 2023
MetagenOmic read Re-Assigner and abundance quantifier
Mora Mora is an read re-assigner that re-assigns query reads to a unique reference. Main steps of Mora: Calculate the expected abundance levels of the
8 Nov 18, 2022
Python+Rust implementation of the Probabilistic Principal Component Analysis model
Probabilistic Principal Component Analysis (PPCA) model This project implements a PPCA model implemented in Rust for Python using pyO3 and maturin. In
11 Dec 16, 2022
Site frequency spectrum estimation based on window expectation-maximisation algorithm
winsfs winsfs is a tool for inference of the site frequency spectrum ("SFS"). Quickstart Assuming SAF files have already been made, default estimation
8 Nov 1, 2022
A bot for competing with estimation (cards game) pro players and actually beat them 💪
Estimation bot 🤖 What's estimation? The card game Estimation is a trick-taking game where you score points by correctly predicting the amount of tric
2 Dec 18, 2021