A vcf parser that use memory mapping to get high performance.

Related tags

Parsing biommap
Overview

biommap

Test Lints MSRV CodeCov Documentation License

An efficient bioinformatics file parser based on memory mapping of file.

WARNING:

  • biommap work only on uncompressed seekable file
  • biommap is tested only on Linux
  • biommap is still in developpement many thing can change or be break

Usage

From source

In your Cargo.toml put

biommap = { git = "https://github.com/natir/biommap/", branch = "main" }

Minimum supported Rust version

Currently the minimum supported Rust version is 1.60.

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